Get BLAST options for a QuickBLAST instance as a string.

Get the BLAST options for a QuickBLAST instance.

GetQuickBLASTOptions(ptr)

Arguments

ptr

(Rcpp::XPtr<QuickBLAST>) or (unsigned int) Pointer/ID of QuickBLAST instance

Value

(string) BLAST options as std::string

See also

GetAvailableBLASTOptions(), GetQuickBLASTEnums(), SetQuickBLASTOptions()

Examples

if (FALSE) { # \dontrun{
blastp_inst <- QuickBLAST::CreateQuickBLASTInstance(
  seq_type = 1,
  strand = 0,
  program = "tblastn",
  save_sequences = F,
  save_hsp_sequences = F
)
QuickBLAST::GetQuickBLASTOptions(
  blastp_inst
)
} # }